Processing...
Toggle navigation
Toolkit
Home
Documentation
Liu Lab
Back to CistromeDB
Toolkit for Cistrome Data Browser
What factors regulate your gene of interest?
Species
Human hg38
Mouse mm10
Gene or transcript
Data type in Cistrome
Transcription factor, chromatin regulator
Histone mark and variants, chromatin accessbility
The half-decay distance to transcription start site
1kb
10kb
100kb
What factors bind in your interval?
Species
Human hg38
Mouse mm10
Data type in Cistrome
Transcription factor, chromatin regulator
Histone mark and variants
Chromatin accessbility
Interval (genome cordinate)
What factors have a significant binding overlap with your peak set?
Species
Human hg38
Mouse mm10
Data type in Cistrome
Transcription factor, chromatin regulator
Histone mark and variants
Chromatin accessbility
Peak number of Cistrome sample to use
Top 1k peaks according to peak enrichment
Top 10k peaks according to peak enrichment
All peaks in each sample
Bed file
(three columns are required: chromosome, start site, end site, and tab delimited, maximum of 50,000 peaks)
